Open Source Java Data Management Systems - Page 7

Jasper Open Servlet is a Java HTTP servlet that provides complex, drillable reports created with Jasper/iReports. It can be encapsulated into a portlal using an iframe portlet to add reporting capabilities to all your web applications - Files released.

Released August 22, 2013 Lubuntu Blends: Biochemistry 13.04 (Raring) v5.44 Linux Kernel Image 3.8.0-29 Lubuntu Blends are pre-installed Wubi disk image remixes of Ubuntu and Debian Science meta packages, A custom boot loader allows installations to be copied and automatically booted from most external or USB flash drives. Once up and running, use earlier Lubuntu Remix README instructions here until documentation is updated. https://sourceforge.net/projects/portable-linux/files/ Installation 1. Download the Wubi installer http://releases.ubuntu.com/saucy/wubi.exe 2. Install any flavor of Ubuntu. 3. Swap out the root.disk with the ones provided here. Overview LAMP stack running on localhost (127.0.0.1). Scientific, productivity & media packages include R (Rattle Data Miner), GridEngine, Condor, cooperative computing tools, WINE, LibreOffice, Evolution, Clinica, Neuro Debian Desktop, PsycoPy, OpenVibe, 3DSlicer, Paraview, Openshot. Cheers, Gregory Remington

Dexter is a little java program to interactively or semi-automatically extract data from scanned graphs. In its applet incarnation it is used by the Astrophysics Data System. A rudimenary standalone version is provided as well.

Simulates a city grid of streets, intersections and traffic signals. It supports 8 phases with overlaps, right and left hand drive, turnouts, permitted left and right on red, density and semi-actuation and help screens for every panel.

A project to create an interactive, scientifically-accurate 3D model of the HIV virus. Particularly intended for use in education.

With the help of this tool you can call up your CoDeSys web visualization.

DBBrowser is an open source (GPL license), cross-platform tool which can be used to view the contents of a database. It works with Oracle and MySQL. The user can view, modify, delete records without writing SQL.

Step-by-step instructions for making your HVAC (Heating, Ventilation & Air Conditioning) system state-of-art. Covers airflow balancing, temperature control & zoning, energy conservation measures, remote access, 1-wire, XBee devices, home automation

FusionCharts Free is a flash charting component for web applications, desktop applications and presentations. It livens up your boring data by converting it to animated and interactive charts.

In consanguineous families, as a result of inheriting the same genomic segments through both parents, the individuals have stretches of their genomes that are homozygous. This situation leads to the prevalence of recessive diseases among the members of these families. Homozygosity mapping is based on this observation and several recessive disease genes have been discovered with the help of this technique in consanguineous families. The researchers typically use SNP arrays to determine the homozygous regions and then search for the disease gene by sequencing the genes within this candidate disease loci. Recently, the advent of next generation sequencing enables the concurrent identification of homozygous regions and the detection of mutations relevant for diagnosis, using data from a single sequencing experiment. In this respect, we have developed a novel tool that identifies homozygous regions using deep sequence data. Using *.vcf files as an input file, our program identifies the majo

JMagallanes is an open source end user application for Olap and Dynamic Reports written in Java/J2EE. Combines static reports, pivot table and charts. It reads from SQL and other data sources.

LucidDB is a DBMS optimized for business intelligence. Besides architectural innovations such as column-store, it supports many advanced features from SQL:2003, including SQL/MED and user-defined transformations written in Java.

MentDB is an open-source platform driving research into next-generation AI and universal data exchange. Our architecture is built around the revolutionary Mentalese Query Language (MQL). MentDB Weak (Generalized Interoperability): A unified data layer enabling seamless data exchange and application integration (SOA, ETL, Data Quality). We eliminate data silos through a single, generalized data language. MentDB Strong (Strong AI / AGI): The framework for exploring and building Machine Consciousness, free will, and advanced ethical reasoning systems. Based on new-generation AI algorithms.

ScapeToad is an easy to use application for the cartogram creation. Cartograms are deformed maps where the polygon size is proportional to a given statistical value. ScapeToad reads and writes Shapefiles. See <https://github.com/christiankaiser/ScapeToad> for the latest version of the code.

Structure is a framework for two-dimensional molecular visualization written in Java and based on Octet.

Talend Spatial Module (aka Spatial Data Integrator or SDI) is an ETL tool for geospatial. Based on Talend Open Studio, input, output and transform geocomponents are available. IO components read/write GIS formats(eg.PostGIS, GeoRSS). Transformers all

Wow Log Parser is a combat log parser for the game World of Warcraft. The purpose of the program is to parse the files generated with the /combatlog command. The source code can be found on: http://www.gurre.eu/wowlogparser/forum

Apache Gravitino is a high-performance, geo-distributed, and federated metadata lake. It manages metadata directly in different sources, types, and regions, providing users with unified metadata access for data and AI assets.

Project to develop xVRML specs & related s/w tech. VRML97 put 3D worlds on the net & xVRML evolves it w/ Schema-based re-definition. Schema forms base for spec docs & model of the data in a VR world, as well as dev of tech-demo app & plugin s/w.

Java3D 3DS FileLoader for platforms supporting JDK1.4 and Java 3D Highly functional, multiplatform 3DS File format loader Supports: Heirarchical animation Cameras Point Lights Directional Lights Textures Smooth Groups and other features

123VCF has been developed to make the filtration step of VCF files efficient and more importantly easy to understand. It can be used in the most important step of whole exome/genome sequencing data analysis in the research and also clinical settings. User manual: https://dl.adbioinformatics.net/123VCF/123VCF_Manual.ver2.pdf If you use 123VCF, please cite its paper: Eidi, M., Abdolalizadeh, S., Moeini, S. et al. 123VCF: an intuitive and efficient tool for filtering VCF files. BMC Bioinformatics 25, 68 (2024). https://doi.org/10.1186/s12859-024-05661-5 _____________________________________ Authors: Milad Eidi, Samaneh Abdolalizadeh, Soheila Moeini Supervisors: Javad Zahiri, PhD - Masoud Garshasbi, PhD Department of Neuroscience, University of California San Diego, California, USA Department of Medical Genetics, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran

@rbre uses X3D to let people create, visualize, browse and share genealogical data, by using 2D individual icons assembled in 3D family trees. @rbre will include P2P functions for sharing.

As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/

Cube Platform is a decentralized grid computing system that uses P2P Pastry protocol for communication between nodes. It's a big data storage written in Java.

HiSee is a tool for visualizing high dimensional data using one of a variety of projection techniques. A graphical interface is provided for viewing and exploring the projected data.