Showing 136 open source projects for "python libraries"

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  • 1
    Creates interactive plots of data lines over a time scale. Automatic detection of input format and scale will result in instantaneous results without any need for configuration.
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  • 2
    RoiView
    Explore InSAR data and more
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  • 3
    SPIW - Scanning Probe Image Wizard

    SPIW - Scanning Probe Image Wizard

    Scanning Probe Image Wizard - MATLAB Toolbox

    SPIW is a MATLAB toolbox, for automated processing of scanning probe microscope images. Tools are applicable to all SPM images, but the main focus is on images with atomic or molecular resolution. SPIW is primarily a MATLAB toolbox with functions designed to be called in a user's own script. SPIW also has a very basic GUI for browsing and exporting images. For information on SPIW's performance see our publication ( http://dx.doi.org/10.1063/1.4827076 ) in the Review of Scientific...
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  • 4
    wxRays

    wxRays

    Visual x-ray data processor

    Visual x-ray data processor. The routine, writed in Python using wxPython, NumPy, SciPy and mathplotlib libraries for practical and educational purpose.
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  • 5
    Analysis software for Nbody/SPH or SPH simulations (e.g. performed with Gadget II). See http://sourceforge.net/apps/wordpress/hyplot/about and http://sourceforge.net/apps/trac/hyplot/wiki for more information.
    Downloads: 0 This Week
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  • 6
    iTag

    iTag

    Tag images using various categories and modifiers

    iTag has been designed for researchers that rely on photographic census techniques of animals that are hard to detect via image recognition algorithms and was originally developed for counting Grey Seals in the German wadden sea during March 2013. It has since then been further expanded and has now reached beta status. iTag allows Users to define up to 9 different categories and name them accordingly. In addition, 4 modifiers are available to further increase the options during a tagging...
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  • 7
    TinkerCell is a software for synthetic biology. The visual interface allows users to design networks using various biological "parts". Models can include modules and multiple cells. Users can program new functions using C or Python. www.tinkercell.
    Downloads: 23 This Week
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  • 8
    BioImageXD - free open source software for analysis, processing and 3D rendering of multi dimensional, multi data channel, time series image data from microscopy and other sources.
    Downloads: 2 This Week
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  • 9
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated...
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  • 10
    PanelCheck is an easy-to-use software tool for visualization of sensory profiling data using different types of plots. The joint information from the implemented plots provide detailed insight into assessor and panel performance.
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    Downloads: 19 This Week
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  • 11
    MicroView
    MicroView is a 2D/3D image viewer and analysis tool. It is written in Python and uses VTK for all of its graphical capabilities.
    Downloads: 9 This Week
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  • 12
    Vibeplot presents a new and attractive way to visualize vibrational analysis from density functional calculations (DFT). It is especially targeted at the chemists. The interface can either be scripted or used interactively with QVibeplot.
    Downloads: 0 This Week
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  • 13
    Corbomite
    Data logger, manipulator and visualizer. Receives data in CSV format from stdio.
    Downloads: 0 This Week
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  • 14
    Downloads: 0 This Week
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  • 15
    NanoCap

    NanoCap

    Carbon Fullerene and Capped Nanotube Generator

    ...The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the structure generation routines into pre-existing code.
    Downloads: 3 This Week
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  • 16

    The CCP1GUI

    An extensible GUI for computational chemistry codes

    The CCP1GUI project aims to develop a free, extensible Graphical User Interface to various computational chemistry codes developed by the worldwide academic community, with an emphasis on ab initio Quantum Chemistry codes.
    Downloads: 0 This Week
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  • 17
    COV2HTML

    COV2HTML

    A visualization and analysis tool of Bacterial NGS data for Biologists

    COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS...
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  • 18
    Create, check, annotate, merge, diff, split SBML (System Biology Markup Lanugage) documents. The latest version of semanticSBML is webbased with a RESTful interface.
    Downloads: 1 This Week
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  • 19

    BasisViewer

    Browse and visualize your downloaded Basis Band B1 biometric data

    This application allows you to graph your Basis data in several ways and allows you to easily move across dates, plot mulitple attributes simultaneously, and understand trends and answer questions. This application assumes you've already run the BasisRetriever application and downloaded your metrics in csv format.
    Downloads: 0 This Week
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  • 20

    WebChemViewer

    A simple program for sharing molecular structures with associated data

    Sharing lists of molecular structures with associated chemical properties is a common task in computer-aided drug design and medicinal chemistry. WebChem Viewer is a simple, free, open-source program that generates HTML-formatted output that can be viewed in any modern web browser, on any operating system (including mobile), without requiring the installation of additional software. The output can also be easily incorporated into existing web pages. WebChem Viewer is released under the...
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  • 21
    Flightdeck-UI is a project that utilizes the ideas from the design of aircraft controls and instruments for creating computer user interfaces, such as for monitoring.
    Downloads: 1 This Week
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  • 22
    OpenCMISS-Zinc

    OpenCMISS-Zinc

    A Library for Interactive Modelling and Visualisation

    The OpenCMISS-Zinc Library (opencmiss.org/zinc), or Zinc, is a software library for building interactive graphical modelling and visualisation applications. Models are represented in Zinc as mathematical fields defined over domains, including finite elements with support for high-order basis functions, complex parameter mappings and time variation, and image-based fields. Further fields can be defined by mathematical expressions and algorithms on existing fields, including image...
    Downloads: 12 This Week
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  • 23
    Blender Multibool, Searching for Fractal

    Blender Multibool, Searching for Fractal

    Multibool function is slow ;)

    Booleans all meshes on the screen. Plus: A fractal generator and attractor generator with a delicious SEARCH function ;) <meta name="google-site-verification" content="cULQewNGfx-aXCQR9fTJZ1Z7DXbLA5GjqjvAfF_oH5I" />
    Downloads: 0 This Week
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  • 24
    Portable Linux

    Portable Linux

    Portable Ubuntu Linux for Scientific Computing

    Released August 22, 2013 Lubuntu Blends: Biochemistry 13.04 (Raring) v5.44 Linux Kernel Image 3.8.0-29 Lubuntu Blends are pre-installed Wubi disk image remixes of Ubuntu and Debian Science meta packages, A custom boot loader allows installations to be copied and automatically booted from most external or USB flash drives. Once up and running, use earlier Lubuntu Remix README instructions here until documentation is updated....
    Downloads: 4 This Week
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  • 25
    CAPLET

    CAPLET

    GDS visualization and parallelized capacitance extraction

    Project CAPLET is a capacitance extraction toolkit that extract capacitance at field-solver accuracy. CAPLET can directly handle GDS2 layout files into capacitance matrices in both GUI and command line interfaces. The internal extraction algorithm is specialized for VLSI interconnect structures but not exclusively, as long as the structure is of Manhattan geometry and embedded in a uniform dielectric material.
    Downloads: 0 This Week
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