Open Source Java Earth Sciences Software - Page 6

We produced a software for scientists and managers working with marinas, and small harbor. Our software is able to predict the distribution of portuality and vulnerability risk.

jk3d is a java code for 3d interpolation of scattered data. jk3d uses a quality weighted ordinary Kriging method and optional an inverse distances weighting method. It has no graphical user interface and uses ASCII files to define the input.

The linkFlow computer software program enables the user to perform civil hydraulic design tasks in a manner similar to a calculator. Vegetated and reinforced channels of any section can be designed using allowable shear and variable n values. c 2010

mesoFON is an individual-based mangrove forest model. It is a Java implementation of the KiWi model done with RePast Simphony. It contains several new features: (1) You can add up to 10 species via the GUI. However, in principle, the number of species to be included programmatically is unlimited. (2) You can use a variety of growth functions via typing them in as a string on the GUI. (3) The model is transparent, sinc it comes with the Eclipse workbench of RePast.

netcdf-tools is a set of tools for creating netCDF files. It supports command line use on both Windows and Unix as well as use directly as a Java library. Written by CSIRO Australia and funded by the ANDS Australian Research Data Commons Project

Starting from GIMMS values as ascii data (each line will be treated as individual time series), the application can smooth the ts - values by applying different algorithm that are based on Fouriertransformation. Separation of seasonal figure as well as the detection of linear trends is possible. Possible breaks in longterm mean can be detected with a change-point analysis using CuSum algorithms. Phenological events such as start-of-season, day-of-max/day-of-min, end-of-season can be determined via threshold-based algorithms or via analysis of max. increase of NDVI during green-up. These analyses work also for multimodal phenologies where individual seasons (partly) interfere each other. User can navigate through all steps of analysis via GUI or can define complex workflows that will be processed in batch-mode.

Code for the SALAMANDER environmental sensor project. SALAMANDERs are wireless motes (Crossbow TelosB with MSP430 processor) with a string of sensors attached. Mote code is in nesC. DataGetter java code enables mobile phones to collect sensor data.

The program allows the simulation of spatial dynamics in a benthic coral reef community under various environmental settings. Several coral species, with either massive or branching colony growth morphologies are implemented as individual colonies, which compete for space with each other as well as with macroalgae and algal turf. For more details on the first version of the program see also: Kubicek A, Muhando C, Reuter H (2012) Simulations of Long-Term Community Dynamics in Coral Reefs - How Perturbations Shape Trajectories. PLoS Comput Biol 8(11): e1002791. doi:10.1371/journal.pcbi.1002791 http://www.ploscompbiol.org/doi/pcbi.1002791 Version 2.0 of the program assesses feedbacks in coral systems and is published in Kubicek A, Reuter H (2016) Mechanics of multiple feedbacks in benthic coral reef communities. Ecol Modell 329:29-40 doi:10.1016/j.ecolmodel.2016.02.018 http://authors.elsevier.com/a/1SjWD15DJ~lv6v

Voc2RDF facilitates the transformation of simple vocabularies into a format that could be used by Semantic Web tools.

Open-source weather database system for storage of weather/water observations, forecasts, analysis fields, and hindcasts. includes loading program for GRIB files. Visit project website (http://wdb.met.no) for further information. Please note: this project has now moved to http://wdb.met.no

weatherNow is an engine built in Java to retrieve and parse aviation messages, including METAR, NOTAM, TAF, AIRMET or any other that becomes available.

Weatherlib is a Java library providing weather support for your application. It is able to retrieve weather informations from the net and to rearrange them in a object data structure. All of gathered data is reachable through a Java bean-like interface.

Xenophon transfers the log of your wintec wbt-201 gps data logger to your mobile phone. The logfiles are written in wintec's .tk1 format. They can thus be further processed by gpsbabel or timemachineX on your pc.