Showing 37 open source projects for "python data analysis"

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  • 1
    SimpleITK

    SimpleITK

    A layer built on top of the Insight Toolkit (ITK)

    ...Unlike ITK's support of n-dimensional spatio-temporal images, SimpleITK supports 2D, 3D and 4D images. The dimensionality refers to spatiotemporal dimensions, the voxels can be n-dimensional vectors. Open-source multi-dimensional image analysis in Python, R, Java, C#, Lua, Ruby, TCL and C++. Developed by the Insight Toolkit community for the biomedical sciences and beyond.
    Downloads: 18 This Week
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  • 2
    Kornia

    Kornia

    Open Source Differentiable Computer Vision Library

    Kornia is a differentiable computer vision library for PyTorch. It consists of a set of routines and differentiable modules to solve generic computer vision problems. At its core, the package uses PyTorch as its main backend both for efficiency and to take advantage of the reverse-mode auto-differentiation to define and compute the gradient of complex functions. Inspired by existing packages, this library is composed by a subset of packages containing operators that can be inserted within...
    Downloads: 9 This Week
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  • 3

    NEtCAT NanoSurface Analyzer

    NanoSurface Analyzertool is designed for the STM image analysis

    NanoSurface Analyzer tool is designed for the analysis and measurement of surface data at the nanoscale. This application is developed to support researchers working with surface data by providing tools for reading, processing, and analyzing data.
    Downloads: 0 This Week
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  • 4
    SMILI

    SMILI

    Scientific Visualisation Made Easy

    The Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', is an open-source, light-weight and easy-to-use medical imaging viewer and library for all major operating systems. The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with...
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    Downloads: 88 This Week
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  • 5
    ShinyCardinal

    ShinyCardinal

    Mass spectrometry imaging data analysis software tool

    ShinyCardinal is an open-source and vendor-neutral software that covers all steps in MSI data analysis. It leverages the R package Cardinal to enhance its functionalities by introducing several additional important features, such as the removal of background noises and matrix peaks, deisotoping, absolute quantification, network analysis, and metabolite identification. ShinyCardinal is built as a desktop application with a conveniently designed graphic user interface to provide users a stable, consistent, and user-friendly data analysis framework. ...
    Downloads: 0 This Week
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  • 6
    CT4AM

    CT4AM

    Tools for 3D image analysis of additively manufactured parts

    CT4AM is a cross-platform toolkit for 3D-image processing in the domain of additive manufacturing for toolpath visualisation or correlation to tomographic data and related materials science. It is written in C++ and provides small, problem-specific applications for viewing, analysing and visualising of volumetric data from micro-CT scans with respect to the complex process parameters and characteristics of additive manufacturing. Moreover, data analysis and processing of G-code are key assets of the project. ...
    Downloads: 0 This Week
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  • 7
    itom

    itom

    itom - an Open Source Measurement, Automation and Evaluation Software

    itom is an open source software suite for operating measurement systems, laboratory automation and data evaluation. One main application of itom is the development and operation of sensor and measurement system for instance in a laboratory environment. Therefore, the software has to be able to communicate with a wide range of different hardware systems, such as cameras or actuators and should provide a diversified and as complete as possible set of evaluation and data processing methods....
    Downloads: 18 This Week
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  • 8
    TextureAtlas Toolbox

    TextureAtlas Toolbox

    A powerful, free and open-source tool for TextureAtlases/Spritesheets

    TextureAtlas Toolbox is an all-in-one solution for working with texture atlases and sprite sheets. Extract sprites into organized frame collections and GIF/WebP/APNG animations, generate optimized atlases from individual frames, or convert between 15+ atlas formats. Perfect for game developers, modders, and anyone creating showcases of game sprites. Formerly known as TextureAtlas to GIFs and Frames Licensed under AGPL-3.0 Third-party licenses: See...
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    Downloads: 51 This Week
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  • 9
    **Zastosowanie**: Głównym celem projektu jest optymalizacja wykorzystania pamięci w graficznych bazach danych poprzez analizę podobieństwa cosinusowego wektorów cech obrazów. Umożliwia identyfikację duplikatów (obrazów bardzo do siebie podobnych), co prowadzi do efektywniejszego zarządzania zasobami. **Program** W chwili obecnej program przeszukuje obrazy w katalogu, do którego ścieżka została zapisana w pliku 'Data\settings.txt'. **Użycie**: Program obsługuje się w terminalu. Po...
    Downloads: 0 This Week
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  • 10
    PI-Based Image Encoder / Converter

    PI-Based Image Encoder / Converter

    Python code able to convert / compress image to PI (3.14, π) Indexes

    Image processing tool that encodes pixel data as indices within the first 16.7 million digits of PI (π). Features high-performance Numba-accelerated search and a signature 'film-grain' aesthetic upon reconstruction. ZIP also include 16 MB file with 16,7 mil numbers of PI Benchmark(Single-Thread): Hardware & Environment Apple Silicon: Apple M2 (Mac mini/MacBook) x86_64 Platform: Intel Core Ultra 5 225F (Arrow Lake, 10 Cores) OS 1: Fedora 43 (GNOME) OS 2: Windows 11 Pro (23H2/24H2) Software: Python 3.14.3 + Numba JIT (latest) Results (Lower is better) Platform / OS CPU Time (Seconds) macOS (Native) Apple M2 52.151311 s (in default setup) Fedora Linux Intel Core Ultra 5 225F 58.536457 s (in default Power Management: Balanced) Windows 11 Intel Core Ultra 5 225F 59.681427 s (important! ...
    Downloads: 0 This Week
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  • 11

    Spectral Python

    A python module for hyperspectral image processing

    Spectral Python (SPy) is a python package for reading, viewing, manipulating, and classifying hyperspectral image (HSI) data. SPy includes functions for clustering, dimensionality reduction, supervised classification, and more.
    Downloads: 1 This Week
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  • 12
    LaueTools

    LaueTools

    open source python packages for X-ray MicroLaue Diffraction analysis

    LaueTools is an open-source project for white beam Laue x-ray microdiffraction data analysis including tools in image processing, peaks searching & indexing, crystal structure solving (orientation & strain) and data & grain mapping visualisation. Python 3 Code and new features are now at: https://gitlab.esrf.fr/micha/lauetools
    Downloads: 1 This Week
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  • 13

    MIPPY

    Modular Image Processing in Python

    MIPPY is a minimalistic DICOM image browser with built-in image processing modules. Its modular design means it can be extended with any number of user-created modules for image processing and analysis.
    Downloads: 0 This Week
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  • 14
    LithoGraphX

    LithoGraphX

    LithoGraphX, 3D data analysis and visualization

    LithoGraphX is an open source software for scientists, by scientists. It aims at providing the plant science community with a solid, open, community developed, software for 3D data analysis and visualization. LithoGraphX is a fork of the MorphoGraphX project.
    Downloads: 10 This Week
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  • 15
    CognitionMaster

    CognitionMaster

    object-based image analysis framework

    Wienert S, Heim D, Kotani M, Lindequist B, Stenzinger A, Ishii M, Hufnagl P, Beil M, Dietel M, Denkert C, Klauschen F. CognitionMaster: an object-based image analysis framework. Diagn Pathol 2013, 8:34
    Downloads: 0 This Week
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  • 16
    composight
    Composight is a cross-platform toolkit for 3D-image processing in the domain of composite materials science. It is written in C++ and provides small, problem-specific applications for viewing, filtering and segmentation of volumetric data such as micro-CT scans. The main objective is not to provide yet another complex application for volume data visualization and medical image processing. Instead, Composight is a collection of small and simple apps that have already been successfully used to...
    Downloads: 0 This Week
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  • 17
    TESTIMAGES

    TESTIMAGES

    Testing images for scientific purposes

    ...Please cite the following papers when using any image in this archive: * ASUNI N, GIACHETTI A, "TESTIMAGES: A Large Data Archive For Display and Algorithm Testing", Journal of Graphics Tools, Volume 17, Issue 4, 2015, pages 113-125, DOI:10.1080/2165347X.2015.1024298 * ASUNI N, GIACHETTI A, "TESTIMAGES: a large-scale archive for testing visual devices and basic image processing algorithms", STAG - Smart Tools & Apps for Graphics Conference, 2014.
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    Downloads: 111 This Week
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  • 18
    RTToolbox

    RTToolbox

    Library to support quantitative analysis of radiotherapy data

    Moved to: http://github.com/MIC-DKFZ/RTTB RTToolbox is a software library, developed at the DKFZ to support quantitative analysis of treatment outcome for radiotherapy. The RTToolbox was designed following object-oriented design principles and was implemented in the language C++. It supports the import of radiotherapy data (e.g. dose distributions and structure sets) from DICOM-RT format and other standard image processing formats by using a bridge to ITK.
    Downloads: 0 This Week
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  • 19
    Gimias

    Gimias

    Graphical Interface for Medical Image Analysis and Simulation

    GIMIAS is a workflow-oriented environment for solving advanced biomedical image computing and individualized simulation problems, which is extensible through the development of problem-specific plug-ins. In addition, GIMIAS provides an open source framework for efficient development of research and clinical software prototypes integrating contributions from the Physiome community while allowing business-friendly technology transfer and commercial product development.
    Downloads: 0 This Week
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  • 20
    Open Cezeri Library

    Open Cezeri Library

    Effective Linear Algebra and Computer Vision Library with JAVA

    OCL stands for Open Cezeri Library (yet another linear algebra and matrix library). This library provides rapid coding as matlab ease of use. To learn for library please try to use test examples at OpenCezeriLibrary\test\test. It is originally developed at el-cezeri laboratory of Siirt University, in order to establish generic framework of reusable components and software tools for machine vision, machine learning, AI and robotic applications. Currently, it holds following main concepts 1-...
    Downloads: 0 This Week
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  • 21
    Tigris is an open source suite of classes and programs implemented in C++ for single particle electron microscopic image processing.
    Downloads: 0 This Week
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  • 22
    Orfeo ToolBox

    Orfeo ToolBox

    OTB is an open-source C++ library for remote sensing images processing

    ...Orfeo ToolBox has three main access depending on the category of user: write processing chains in C++ using existing filters or creating new ones, use the OTB applications, which is a plugin-based framework allowing to extend high-level processing chains from various environment ( command-line, QT, QGis, Python....) or use Monteverdi, a software for everyday life image manipulation and analysis.
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    Downloads: 2 This Week
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  • 23
    BioImageXD - free open source software for analysis, processing and 3D rendering of multi dimensional, multi data channel, time series image data from microscopy and other sources.
    Downloads: 2 This Week
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  • 24
    FreeROI
    FreeROI is a versatile image processing software developed for neuroimaging data. Its goal is to provide a user-friendly interface for neuroimaging researchers to visualize and analyze their data, especially in defining region of interest (ROI) for ROI analysis.
    Downloads: 0 This Week
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  • 25
    Microscopy Image Processing Package
    XMIPP is an image processing suite for 3D-reconstruction of biological specimens from transmission electron microscopy data. NOTE that stable releases (including binaries) are longer stored at Sourceforge, but are available at http://xmipp.cnb.csic.es
    Downloads: 6 This Week
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