Search Results for "annotation" - Page 4
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Showing 237 open source projects for "annotation"
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Complete Data Management for NonprofitsNewOrg is a robust platform built with enhanced features to help non-profit organizations that capture and integrate the information from all of their operational areas to better manage volunteers, clients, programs, outcome reporting, activity sign-ups & scheduling, communications, surveys, fundraising activities and Development campaigns. NewOrg can truly deliver an intuitive product that will help manage your Committees, Donors, Events, and Memberships so that the organization runs efficiently.
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Power through agendas and documents, make more informed decisions and conduct board meetings faster.iBabs not only captures the entire decision-making process – it takes all the paperwork out of meetings. iBabs empowers everyone who has ever organized or attended, a meeting. With a seemingly simple app that offers complete control and a comprehensive overview of all those fiddly details. With about 3000 organizations and over 300,000 users, iBabs gives you peace of mind. So you can quickly organize effective meetings, and good decisions can be made with confidence. iBabs didn’t just happen overnight. We started analyzing and simplifying board meeting processes many years ago. We understand all the work that goes into meetings, and how to streamline everything so it all flows smoothly. On any device, confidentially, securely and automatically. Make good decisions with confidence.
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EXMARaLDA stands for "Extensible Markup Language for Discourse Annotation". It's a system of concepts, data formats and tools for the computer assisted transcription and annotation of spoken language, and the analysis of spoken language corpora. This project's source code has moved to https://github.com/Exmaralda-Org/exmaralda
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...It performs several steps of the reconstruction process, including the functional genomic annotations of the whole genome. Moreover, merlin includes tools for the identification and annotation of transport proteins encoding genes, as well as the generation of transport reactions for such carriers. Also, merlin includes tools for the compartmentation of the model that predict the localisation of the proteins encoded in the genome, and thus the localisation of the metabolites involved in the reactions induced by such proteins. ...
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JakeWharton Hugo
Annotation-triggered method call logging for your debug builds
...The annotation doesn’t remain in the compiled class for non-debug builds, so there’s zero runtime penalty in release. Hugo uses bytecode/annotation processing behind the scenes but maintains simple API usage for developers. It’s especially useful during development and debugging phases in large Android codebases where tracing logic by hand would be tedious. -
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GenomeView is a genome browser and annotation editor that displays reference sequence, annotation, multiple alignments, short read alignments and graphs. Most major data formats are supported. Local and internet files can be loaded. This project has moved to GitHub: https://github.com/GenomeView/genomeview
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Streamline Hiring with Skill AssessmentsCanditech offers innovative, cheat-proof skill assessments and job simulations to transform your hiring process. From technical skills to soft skills, we help you assess candidates on actual job performance. With over 500 customizable tests and powerful video interview features, you can evaluate real-world capabilities, streamline your hiring, and reduce biases. Whether you’re hiring for remote roles, mass hiring, or looking to expand your diversity pool, Canditech’s data-driven platform ensures the right candidates are chosen for the job every time.
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Sidi
simple dependency framework for java
Intention is to provide annotation based depenendy injection. Including EntityManager, its transaction handling, mongodb support and some application essentials like resource/property/configuration accessing. It's somewhat like a container known from EJB or an application context in Spring. -
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GeneticThesaurus
Annotation of genetic variants in repetitive regions
GeneticThesaurus enables analysis of genetic variation in repetitive regions. See project wiki for details. -
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ISO GrAF
Experimental Java library for reading and writing GrAF/XML files.
The Graph Annotation Framework (GrAF) models linguistic annotations using a data model based on Graph theory and algorithms. The GrAF standard is a work product of ISO TC37SC4 Working Group 1. This Java library is NOT part of the GrAF standard and standoff annotation files produced by the library may not be GrAF compliant. -
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argparse4j
Command line argument parser library for Java
The argparse4j is a command line argument parser library for Java based on Python's argparse. -
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Sensory Effect Video Annotation
Annotation tool for sensory effects and multimedia content
This program provides means for annotating multimedia content (e.g., videos) with sensory effects based on the MPEG-V: Media Context and Control standard, especially Part 3: Sensory Information (ISO/IEC 23005-3). Now with integrated Sensory Effect Simulator (SESim). -
The top-rated AI recruiting platform for faster, smarter hiring.Humanly is an AI-first recruiting platform that helps talent teams hire in days, not months—without adding headcount. Our intuitive CRM pairs with powerful agentic AI to engage and screen every candidate instantly, surfacing top talent fast. Built on insights from over 4 million candidate interactions, Humanly delivers speed, structure, and consistency at scale—engaging 100% of interested candidates and driving pipeline growth through targeted outreach and smart re-engagement. We integrate seamlessly with all major ATSs to reduce manual work, improve data flow, and enhance recruiter efficiency and candidate experience. Independent audits ensure our AI remains fair and bias-free, so you can hire confidently.
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TUIT
Taxonomic Unit Identification Tool
...Read our paper in Biotechniques: http://www.ncbi.nlm.nih.gov/pubmed/24502797 Taxonomic Unit Identification Tool (TUIT) is a free open source platform-independent software, designed specifically to facilitate taxonomic annotation of nucleotide sequences via BLAST homology search against the NCBI databases. TUIT is immediately applicable for both to 16S microboime studies as well as for taxonomic classification of the nucleotide reads. Please see the project's Wiki page. -
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Sensory Effect Simulator
Simulator for sensory effect and multimedia content
This program provides means for simulating multimedia content (e.g., videos) with sensory effects based on the MPEG-V: Media Context and Control standard, especially Part 3: Sensory Information (ISO/IEC 23005-3). NOTE: SESim will not be developed any further as it is now integrated in the Sensory Effect Video Annotation (SEVino) tool: https://sourceforge.net/projects/sevino/ -
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Parameterized Unit Test Framework
PUT extension for JUnit 4
Parameterized Unit Test Framework is an open-sourced PUT library for JUnit 4. This project is developed in my spare time and currently updated actively. Core features: 1. Separation of test data from test code 2. Annotation support 3. Automated test parameter injection 4. Dedicated test runner -
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VarImpact
Extracting effects of mutations on molecular properties from text.
...The results of thousands of small-scale experiments, on the other hand, are present in the literature and discuss observations made ranging from alteration of active sites to changes in drug response resulting. Our aim is to bridge the gap between detection of genetic variants and their annotation with aforementioned observations. VarImpact extracts experimentally observed changes from the literature. This allows to annotate sequencing results with observed impacts, gather information about the mutational landscape observed in disease populations, and to study disease mechanisms. Check our Wiki for more! -
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The BioNLP UIMA Component Repository provides UIMA wrappers for novel and well-known 3rd-party NLP tools used in biomedical text prosessing, such as tokenizers, parsers, named entity taggers, and tools for evaluation.
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Vogon is a Ontology-based text annotation tool for creating relations between terms in a text. This relations can then be exported as RDF triples.
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Quadriga
Quadruple Network Management System
Quadriga is a web-application that acts as a clearing-house for text annotations -- in the form of contextualized triples, or “quadruples,” that form complex graphs -- generated with the Vogon desktop application (https://sourceforge.net/projects/gobtan/), and as an environment for managing text-annotation projects. It relies on a central authentication system for user authentication, a dictionary service (Wordpower) and an authority file service (Conceptpower). Quadriga can connect to a DSpace repository, allowing users to select items stored in the repository for annotation. Quadriga can use standard graphs to map quadruples onto conventional semantic graphs that can be submitted to a triple store, and used for interactive websites and visualizations. -
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Proteus
Proteus is an interactive Laboratory Journal for Gel-based Proteomics
Proteus is an interactive Laboratory Journal for Gel-based Proteomics. It features integration with the Delta2D software for peak import and annotation export. -
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OPTIMA cidoc-crm Semantic Annotation
Semantic annotation of archaeology reports with respect to CIDOC-CRM
The semantic annotation system OPTIMA is the result of Andreas Vlachidis PhD work, (supervised by Prof. Douglas Tudhope, University of Glamorgan, UK). OPTIMA performs the NLP tasks of Named Entity Recognition, Relation Extraction, Negation Detection and Word Sense Disambiguation using hand-crafted rules and SKOS terminological resources (English Heritage Thesauri and Glossaries). -
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RapidJDBC
RapidJDBC - Java library for easier JDBC and SQL development
A JDBC wrapper build on AspectJ interceptors. Annotation based solution. Also provides a simple ORM for entities. For information please visit homepage or read readme.md file from source and release. -
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justsimple
the paradigm MVC implemented by using Java annotations on a Swing app
This simple framework allows the implementation of the paradigm MVC (Model-View-Controller) for the development of any Java Standalone Desktop application just by using only one Java annotation. It was called "just simple" because the developer has just to define 3 separated and independent classes, a model, a view and a controller... and all the work of putting together is made by the the framework that discovers the annotations (specified in each class) and mix all together their functionalities. -
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LightAdmin
Pluggable data administration UI interface for Java web applications
The primary goal of the project is to speed up application development by bringing pluggable fully operational data management back-end for JPA based applications and to relieve your codebase for more important stuff. -
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Knowtator is a general-purpose text annotation tool that is integrated with the Protégé knowledge representation system. Knowtator facilitates the manual creation of training and evaluation corpora for a variety of biomedical language processing tasks.
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eXtreme Design (XD) is a framework for pattern based ontology design. This project is tightly related to the http://ontologydesignpatterns.org community. The project is manteined by the Semantic Technology Laboratory (STLab) team.
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A screen capture / screenshot and edit utility written in java to be cross platform. It allows the selection of an area with instant, inplace markup and annotation ability, then copy to clipboard or save to file.
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RDonasco Security
A security application that can be used as a shared service
For full details of this application, please visit https://bitbucket.org/rdonasco/rdonasco-lib/wiki/Home The source codes for this project can be downloaded by cloning its repository which uses mercurial. ** Use the following clone command: ** hg clone https://bitbucket.org/rdonasco/rdonasco-lib
