Search Results for "structural analysis"
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Showing 19 open source projects for "structural analysis"
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Tencent Cloud Code Analysis
Static code analysis
Tencent Cloud Code Analysis (TCA for short, used internally by the R&D code CodeDog ) is a cloud-native, distributed, high-performance comprehensive code analysis and tracking platform that integrates many analysis tools, including server, web and client The three components have integrated a number of self-developed tools, and also support the dynamic integration of analysis tools of various programming languages in the industry. Obtain the Tencent Cloud code analysis platform by... -
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Torch Pruning
DepGraph: Towards Any Structural Pruning
Torch-Pruning is an open-source toolkit designed to optimize deep neural networks by performing structural pruning directly within PyTorch models. The library focuses on reducing the size and computational cost of neural networks by removing redundant parameters and channels while maintaining model performance. It introduces a graph-based algorithm called DepGraph that automatically identifies dependencies between layers, allowing parameters to be pruned safely across complex architectures. ... -
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Skill Scanner
Security Scanner for Agent Skills
This repository is a public security-focused scanning tool intended to analyze and assess AI agent skills for potential issues, quality concerns, and vulnerabilities. It acts as a scanner that inspects Agent Skills packages to flag structural problems, inconsistencies, or security flaws before they are deployed or integrated into agent workflows. Because agent skills can contain executable instructions and logic, scanning them for risky patterns is essential to prevent inadvertent... -
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LLM-Pruner
On the Structural Pruning of Large Language Models
...LLM-Pruner addresses this issue by identifying and removing non-essential components within transformer architectures, such as redundant attention heads or feed-forward structures. The framework relies on gradient-based analysis to determine which parameters contribute least to model performance, enabling targeted structural pruning rather than simple weight removal. After pruning, the framework applies lightweight fine-tuning methods such as LoRA to recover performance using relatively small datasets and short training times. -
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FreeSEM
Free and open-source desktop application designed for SEM
FreeSEM is a free, open-source desktop application designed for researchers and students to perform Structural Equation Modeling (SEM) for statistical and research analysis. It allows users to visually build models using a drag-and-drop interface to create path diagrams and analyze relationships between observed and latent variables. The software supports methods such as exploratory factor analysis, covariance-based SEM, partial least squares SEM, and meta-SEM, and it provides model fit statistics like CFI, TLI, RMSEA, SRMR, and chi-square to evaluate models. ... -
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CAMPARI
Software for molecular simulations and trajectory analysis
We are proud to introduce version 5 of CAMPARI. We have added a number of new features, most notably a Python interface for interpreting user-supplied code (with the help of ForPy), a novel trajectory storage standard (with the help of libpqxx/PostgreSQL), and a module for performing transition path theory. Naturally, CAMPARI continues to provide the reference implementation of the ABSINTH force field paradigm and implicit solvation model. CAMPARI is a joint package for performing and... -
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FEATool Multiphysics - FEA & CFD Toolbox
FEATool Multiphysics is an easy-to-use FEA and CFD Simulation Toolbox
FEATool Multiphysics (https://www.featool.com) is a fully integrated toolbox for computer aided engineering CAE, finite element analysis & fluid dynamics simulations. With a very easy-to-use GUI, anyone is now able to quickly set up and perform large scale dynamical and complex engineering physics simulations, with coupled fluid flow, heat transfer, structural mechanics, chemical transport, and electromagnetics effects, without having to learn complex programming. ... -
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DockStream
A Docking Wrapper to Enhance De Novo Molecular Design
DockStream is a docking wrapper providing access to a collection of ligand embedders and docking backends. Docking execution and post hoc analysis can be automated via the benchmarking and analysis workflow. The flexilibity to specifiy a large variety of docking configurations allows tailored protocols for diverse end applications. DockStream can also parallelize docking across CPU cores, increasing throughput. DockStream is integrated with the de novo design platform, REINVENT, allowing one to incorporate docking into the generative process, thus providing the agent with 3D structural information. -
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Frontend Regression Validator (FRED)
Visual regression tool used to compare baseline and updated instances
...FRED is responsible for automatic visual regression testing, with the purpose of ensuring that functionality is not broken by comparing a current(baseline) and an updated version of a website. The visual analysis computes the Normalized Mean Squared error and the Structural Similarity Index on the screenshots of the baseline and updated sites, while the visual AI looks at layout and content changes independently by applying image segmentation Machine Learning techniques to recognize high-level text and image visual structures. This reduces the impact of dynamic content yielding false positives. ... -
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2D Structural Analysis
Determine the bending moments, shear forces, axial forces and displace
2D Structural Analysis in Python by Ritchie Vink A collection examples of 2D Finite Element Analysis (FEA) made with Jupyter Notebook Lab - https://jupyter.org/ To install Jupyter - https://jupyter.org/install ===== App is available on Play Store -> https://play.google.com/store/apps/details?id=com.ulm.struct If you want to download a python editor for your android smartphone follow this link -> https://play.google.com/store/apps/details? -
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Biskit is a python library for structural bioinformatics research. It simplifies the analysis of macromolecular structures, protein complexes, and molecular dynamics trajectories and offers a platform for the rapid integration of external programs. PLEASE NOTE: The Biskit source code as well as any later releases are now hosted on https://github.com/graik/biskit The sourceforge repo is only kept here for reference.
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xPyder PyMOL Plugin
Analyze and visualize coupled residues and their networks in proteins
...PSN), and more, to produce highly customizable publication-quality images. xPyder identifies networks (using concepts from graph theory, such as hubs and shortest path searching), compares matrices and focuses the analysis on relevant information by filtering the data using a modular, user-expandable plugin system that takes advantage of structural and dynamical information, contributing to bridge the gap between dynamical and mechanical properties at the molecular level. -
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SPADE
A toolkit for developing and deploying protein structure algorithms.
The Structural Proteomics Application Development Environment is a Python tool kit for developing and deploying bioinformatics applications. Handles graphics, analysis, and modeling of protein sequence and structure. Source and Win installers available. SPADE source code can be cloned from http://www.github.com/deaconjs/SPADE. -
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ParaSim
Parallelized calculation of molecular similarities
Diversity assessments and comparisons of large compound databases require calculating similarities of millions of compounds in an affordable time. ParaSim addresses this challenge by parallelizing the calculations according to the number of computing cores available on a single machine. It is optimized for the throughput of very large numbers of query structures against very large numbers of reference structures. As as special feature, ParaSim allows to store and and to access frequently... -
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pyTruss
Simple 3D Structural Analysis
Basic 3D structural analysis in python. GUI allows building simple 3D shapes, applying static loads and monitoring dynamic load on beams. Based on OpenGL and ODE. -
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The neuroimaging in python (NIPY) project is an environment for the analysis of structural and functional neuroimaging data. It currently has a full system for general linear modeling of functional magnetic resonance imaging (fMRI).
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MBDyn_sim_suite is a collection of free pre&post-processing tools and simulation models for the open-source multi-body analysis software MBDyn forming a general purpose simulation environment for structural dynamics with an emphasis on wind turbines.
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PySDB is simple to use field data manager for structural geologists written in Python. Data are traditionally organized by sites and rock units, classified by structural types and could be freely tagged by user-defined labels.
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