Search Results for "data processing" - Page 3
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Showing 95 open source projects for "data processing"
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ImageJforXTF
Open source software for processing XTF files
This project was born from a stage at the "Signals and Images Lab (si.isti.cnr.it), Institute of Information Science and Technologies of the National Research Council of Italy". ImageJforXTF extends the open source ImageJ software with functionalities that allow to open and manage XTF files. This kind of files is used to record sonar and bathymetric data. An user can choose to open any file with extension ".xtf" so that the program parses it and shows the resulting image. Then the user can... -
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CallSim
low-volume read processing base corrector
CallSim is a software application that provides evidence for the validity of base calls believed to be sequencing errors and it is applicable to Ion Torrent and 454 data. CallSim provides a final classification or rescue of a base/indel in reads, where putative variants have been identified via typical SNP/indel workflows. plots rendered by: JFreeChart library http://sourceforge.net/projects/jfreechart/ -
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SemaRule Navigator is an Integrated Suite of Open-Source and Free-License Software, placing Semantic and Text Analysis Technologies in the toolbox of Researchers, Students, and Enterprises.
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This is a Java-based project for complex event extraction from text and co-reference resolution. Currently the code can read BioNLP shared task format (http://2011.bionlp-st.org/) and i2b2 Natural Language Processing for Clinical Data shared task format (https://www.i2b2.org/NLP/DataSets/Main.php). Event extraction includes finding events and the parameters for an event in a text. The method is based on SVM but other ML algorithms can be adopted. The method details are explained in the following paper: Ehsan Emadzadeh, Azadeh Nikfarjam, and Graciela Gonzalez. 2011. ...
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Melis Platform is an enterprise-grade Low Code Platform simplifying app creation, management, and delivery.Melis is a new generation of Content Management System and eCommerce platform to achieve and manage websites from a single web interface easy to use while offering the best of open source technology.
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This software allows for a user to generate test data. This is useful for testing Hadoop or other data processing clusters.
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ELIA(Eyegaze Language Integration Analysis) supports the analysis of eye-tracking data for studies in language processing. ELIA eases early analysis of data to enable iterative development of experiments in response to spoken language.
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clinicalStudyTracker
Clinical study tracker tracks case study members through activities.
Developed at Medical Research Council UK to meet a common clinical trial need to track various types of clinical data. Users log dates of completed tasks against participant ID. Simple, useable, reduces lost data! Makes graphical progress reports. -
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Knime (http://www.knime.org) nodes for sequence bioinformatics. Sequime is an eclipse plug-in for the KNIME data mining platform, providing additional nodes for reading, processing and visualizing sequence information.
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Java Data Processing Project aims to manipulate text file containing scientific data such as time/intensity scan or spectrum. Jdpp provide large flexibility to read all possible time duration and date format. It is originally design to treat MS data.
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FusionAuth: Authentication and User Management SoftwareFusionAuth adds login, registration, SSO, MFA, and a bazillion other features to your app in days - not months.
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IDEA (Interactive Display for Evolutionary Analyses) augments PAML with a graphical interface, phylogeny reconstruction using PhyML or PHYLIP, convenient and efficient parallel processing and visualizations.
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UFOmatics aims to provide a full information platform for standardizing/unifying exchange, processing and formats of ufological data, as well as the way to access them.
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The EDAM ENCHILADA - The Exploratory Data Analysis and Management Project's Environmental Chemistry Data Processing and Mining Application.
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Open data mining platform. Provides common architecture for algorithms of various types. Efficient processing of arbitrarily large volumes of data thanks to data streaming. Weka and Rseslib partially integrated. (www.debellor.org)
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Image Restoration and Inpainting: MinGW/OpenGL/Visual c++/Java image processing enhancing/restoring/detecting/recovering image parts(Old painting cracks...) FastRestorarion, 2D (Un)Splitted Linear Solver, nonlinear solver: conjugate gradient,QuasiNewton
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Sanchay is a collection of tools and APIs for language researchers. It has some implementations of NLP algorithms, some flexible APIs, several user friendly annotation interfaces and Sanchay Query Language for language resources.
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Avenzoar is a one-year exploration of renal cell carcinoma morphology and its related single nucleotide polymorphisms (SNPa) as a method of automating diagnosis of cancer by using a computer-aided decision tree controlled by analytical statistics.
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The aim of the project is the creation of an multiuser, webenabled, datahandling, processing and visualisation tool for engineering data from the real word - with Datacollection, Charting, Mapping, Alerting, Messaging and Reporting capabilities .....
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jIR is an open source project focused on building an open platform for image processing tasks. It is composed of individual algorithms whose task is to extract or compare information in a data set of images.
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This is a visual pipeline framework for batch processing data. It is a plugin to Eclipse Platform. It is a general framework designed to be customized for specific field. One example is http://sf.net/projects/camba
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The Magnetic Resonance Spectroscopy Toolkit is an open-source software toolkit for processing and analyzing MRS data.
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JOELib/JOELib2 is a cheminformatics library which supports SMARTS substructure search, descriptor calculation, processing/filtering pipes, conversion of file formats, 100% pure Java, and interfaces to external programs (e.g. Ghemical) are available.
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TiMAT2 contains tools for low and high level genomic tiling microarray analysis using the Affymetrix, NimbleGen, and Agilent platforms. It is designed for processing single and multi chip data sets from ChIP-Chip, RNA difference, and aCGH experiments.
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JLongTCPConn is a developing toolkit for TCP connection and session. It does the jobs of TCP processing (such as login, session maintainment, active-test or heartbeating, and data buffering), which makes you focus on application layer logics.
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EDI-Knight is an integration and translation software focussing EDI (Electronic Data Interchange), CSV (Character Separated Values), and XML. There's a command line tool for batch processing as well as a Java/J2EE conformant API.
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The aim of the project is to provide open source collection of algorithms in the field of spectroscopy: data handling and processing, modeling and artificial intelligence tools.
