Showing 140 open source projects for "linux basic programming"

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  • 1

    hrefinder

    Detection of homologous recombination events from SNP data

    This software detects homologous recombination events (HREs) from SNP data. Based on SNP alleles calls and locations, it breaks the genomes into locally colinear blocks, and looks for cases where SNPs do not agree with the vertical pattern of inheritance in a phylogeny. It applies a dynamic programming algorithm to model whether changes within a block are likely a result of mutations, sequencing errors, or HRE. We use information from the nearby SNPs, so that if 1-2 alleles in a series of...
    Downloads: 0 This Week
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  • 2
    C++ Airline Travel Market Simulator
    That project aims at studying and comparing typical airline IT methods, for instance RM-related algorithms. It works from a Unix/Linux/Mac command-line, and exposes basic APIs. It is being developed in C++, with Python wrappers for some components.
    Downloads: 0 This Week
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  • 3
    A web-based interface for the Hadoop MapReduce framework that simplifies the process of writing and running MapReduce jobs. Aimed at introducing parallelism concepts in introductory computer science courses.
    Downloads: 0 This Week
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  • 4

    KSR10 USB Python controller

    Control the KSR10 Robot Arm (Velleman) through USB with Python.

    This project aims to control the KSR10 Robot Arm (Velleman) through USB with the programming language Python. Requirements: - Python (tested with version 2.6 and 2.7) - modules: pyusb (wich on itself requires libusb or openusb)
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    Network Discovery Software | JDisc Discovery

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  • 5

    Pysimony

    A Pythonic Implementation of Parsimony Inference of Phylogeny

    ...I have clearly avoided object-oriented programming. Nevertheless, I distribute this imagining it might someday be slightly educational or at least provide a laugh at the pathetic attempt it makes to reinvent the wheel
    Downloads: 0 This Week
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  • 6

    Electrophysiology & circular stats tools

    Data analysis and circular statistics with OpenElectrophy and R

    Set of tools for basic analysis of electrophysiological data. The Python classes show how to call OpenElectrophy functions and save data. The R library applies circular statistics to spike phase data and saves the best von Mises fit and the Rayleigh statistics on the disk. The wavelet coherence analysis is done in R by the package "sowas". Check the module R_coherence to see how we solved that problem. This packages may be useful for people who start using OpenElectrophy and circular...
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  • 7
    OPyCua

    OPyCua

    OPC UA communication stack written in python

    The goal of this project is to implement an OPC UA communication stack using the python programming language. Currently we are working on a series of articles, describing how we can use python to implement the communication stack. Some code snippets have already been written!
    Downloads: 0 This Week
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  • 8
    A compiler wrapper and a set of editor plugins allowing you to easily use Greek letters, accents, and other Unicode symbols in any programming language.
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  • 9
    LibVsg is a 2D/3D software library with a focus on basic geometric manipulations. It's released under the GNU LGPL. Written for C, it provides support for single and double precision arithmetics. A Python wrapper also comes with the distribution.
    Downloads: 0 This Week
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  • 10
    Graph-based Extraction and Summarization - a generic graph-based summarization framework. Basic functionality is provided - third-party modules can be plugged in.
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  • 11
    PyEPL (Python Experiment-Programming Library) is a library for coding psychology experiments in Python. It supports presentation of both visual and auditory stimuli, and supports both manual (keyboard/joystick) and sound (microphone) input as responses.
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  • 12
    OWSLib is a Python package for client programming with Open Geospatial Consortium (OGC) web service (hence OWS) interface standards, and their related content models.
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  • 13
    A GPR processer and viewer written in Python!
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  • 14
    Khronos DES
    General purpose discrete event simulation (DES) framework for the Python programming language. Khronos gathers ideas from other simulation software and tries to provide a simple and poweful toolset for simulation of discrete systems.
    Downloads: 0 This Week
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  • 15
    MBLogic
    Complete manufacturing automation platform for factory and process equipment. It includes multi-protocol communications (including Modbus/TCP), PLC soft logic, HMI, and tools for troubleshooting and installation in 4 comprehensive packages.
    Downloads: 5 This Week
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  • 16
    Protein ALignment Optimizer
    Protein ALignment Optimiser (PALO) is a script for the selection and alignment of the best combination of transcripts among orthologous genes. PALO is mainly written in Python, although other programming languages are also implemented (R, Perl...).
    Downloads: 0 This Week
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  • 17
    A simple and still alpha Python script to extract features out of an OpenStreetMap (OSM) file into basic Keyhole markup language (KML)
    Downloads: 1 This Week
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  • 18
    This project is a complete cross-platform (Windows, Linux) framework for Evolutionary Computation in pure python. See the project site at http://pyevolve.sourceforge.net or the blog at http://pyevolve.sourceforge.net/wordpress
    Downloads: 1 This Week
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  • 19
    bestgui
    BESTGUI is a GUI front-end for BEST written in Python and GTK+. BEST (Basic Envisat SAR Toolbox) is an ESA (European Space Agency) software tool designed to facilitate the use of ESA SAR data.
    Downloads: 0 This Week
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  • 20
    Marba
    Educative desktop application that it's main goal is develop any kind of mathematical operation in an easy and quick way. It's focus to users that don't have programming knowledge.
    Downloads: 0 This Week
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  • 21
    This toolkit allows complete control of a microscopy setup from Labview, Matlab, Scilab, Python, .Net, VB, IgorPro, Mathematica and more. Included is a standalone program for image acquisition and scripting control of a scientific microscope.
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  • 22
    Distributed Parallel Programming for Python! This package builds on traditional Python by enabling users to write distributed, parallel programs based on MPI message passing primitives. General python objects can be messaged between processors. Ru
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  • 23
    snlanalytic is a small Python script that takes a stem-and-leaf plot as input and returns basic statistics (sum, mean, median, mode) to the user.
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  • 24
    The CMU personal robotics package offers many robotics algorithms/controllers/drivers that enable robots to perform basic tasks like manipulation and vision. The main infrastructure used is OpenRAVE and Robot Operating System (ROS).
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  • 25
    BCI Project Triathlon
    A three-step approach towards experimental brain-computer-interfaces, based on the OCZ nia device for EEG-data acquisition and artificial neural networks for signal-interpretation.
    Downloads: 0 This Week
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