Open Source Solaris Algorithms

DRAMMS is a software package designed for 2D-to-2D and 3D-to-3D deformable medical image registration tasks. Released by Section of Biomedical Image Analysis (SBIA) at the University of Pennsylvania. Some typical applications of DRAMMS include, -- Cross-subject registration of the same organ (can be brain, breast, cardiac, etc); -- Mono- and Multi-modality registration (MRI, CT, histology); -- Longitudinal registration (pediatric brain growth, cancer development, mouse brain development, etc); -- Registration under missing correspondences (e.g., vascular lesions, tumors, histological cuts). DRAMMS runs in command line in UNIX/Mac OS, It accepts Nifti/ANALYZE/MetaImage image formats. It is fully-automatic --- takes two input images, and generates a registered image and (optionally) the deformation field. More information (installation, tutorial, manual, demonstration, FAQ, etc) can be found at http://www.rad.upenn.edu/sbia/software/dramms/ .

Now part of Apache's Mahout machine learning project at http://mahout.apache.org/-- please see there for latest info and code and releases and support!

C++ BigInt class that enables the user to work with arbitrary precision integers. Latest Version: 10.3 (2019-03-06)

Fiona is a tool to automatically analyze the interactional behavior of a given oWFN. It provides two techniques: it checks for the controllability of the given net by computing the interactiong graph and it calculates the operating guideline for the net.

* Fast GPU linear algebra library (matrix maths) for the C++ language, aiming towards a good balance between speed and ease of use * Provides high-level syntax and functionality deliberately similar to Matlab * Provides an API that is aiming to be compatible with Armadillo for easy transition between CPU and GPU linear algebra code * Useful for algorithm development directly in C++, or quick conversion of research code into production environments * Distributed under the permissive Apache 2.0 license, useful for both open-source and proprietary (closed-source) software * Can be used for machine learning, pattern recognition, computer vision, signal processing, bioinformatics, statistics, finance, etc * Downloads: http://coot.sourceforge.io/download.html * Documentation: http://coot.sourceforge.io/docs.html * Bug reports: http://coot.sourceforge.io/faq.html * Git repo: https://gitlab.com/conradsnicta/bandicoot-code

darknocK detects edges in images. It is using Artificial Neural Networks to enchance the results of standard algorithms.

Adaptive Simulated Annealing (ASA) is a C-language code that finds the best global fit of a nonlinear cost-function over a D-dimensional space. ASA has over 100 OPTIONS to provide robust tuning over many classes of nonlinear stochastic systems.

LASS : Library of Assembled Shared Source. Library of C++ code for scientific purposes.

Machine learning toolkit for unsupervised and semi-supervised clustering that demonstrates excellent results on real-world data (see Bekkerman et al. ICML-2005 and ECML-2006).

Multicore SWARM (Software and Algorithms for Running on Multicore Processors) is an open source library for developing efficient and portable implementations that make use of multi-core processors. David A. Bader (Georgia Tech) began SWARM in 1994.

A dictionary based compressor, that is is different from Lempel Ziv encoding that it doesn't use match lengths and does not need perfect matches.

Provides fast lookup for a Subject Based messaging product using a trie. It allows for configurable wildcard characters to replace a single or multiple subject field(s) (A.B.*.D.>). Insertion in to the tree returns a unique handle for subsequent deletion

This project has moved. Please follow the WWW link below.

Threading Building Blocks offers a rich and complete approach to expressing parallelism in a C++ program. It is a library that helps you leverage multi-core processors for performance and scalability without having to be a threading expert.

antigift could be used for encryption files & folders on USB-flash or HDD partition. Works on Linux (including Android), Windows, Mac OS X, FreeBSD, DragonFly BSD and other on OSes. Do not required installation. Include WIPE tool for wiping free space and tool for recovery forgotten key. See documentation at http://sourceforge.net/p/antigift/wiki/Home/ antigift простой и кросс-платформенный инструмент для шифрования файлов и папок(с ccrypt в качестве основы) Подробности см. на страничке с русской документацией http://sourceforge.net/p/antigift/wiki/rus/

CDS (Concurrent Data Structures) is a C++ template library of lock-free and fine-grained lock-based algorithms. It contains a collection of concurrent data structures: queues, stacks, sets, maps, etc, and safe memory reclamation schema for concurrent containers - Hazard Pointer and user-space RCU. See doxygen doc http://libcds.sourceforge.net/doc/cds-api/index.html. The source code repo for libcds 2.x has been moved to https://github.com/khizmax/libcds

FastAOP is an very high performant AOP (Aspect Oriented Programming) framework for java. The framework was initially developped to support performance profiling and monitoring for large J2EE applications with nearly no runntime overhad. Announcement: jp-mobile and fastAOP will go mobile, please visit jp-mobile (GWT based) website at: http://code.google.com/p/jp-mobile/

Libcutils provides a self-contained set of fundamental routines which are essential to basically any Unix utility or daemon application written in C. The library provides fundamental data structures such as lists, hash-maps, strings and parsing functions for JSON or the typical dot-file based configuration data. The following list summarizes the currently supported functionality: * length delimited instead of NULL terminated strings * memory management based on reference counting * several list processing functions like iterators and map-reduce * support of [Ideal Hash Tries](http://infoscience.epfl.ch/record/64398/files/idealhashtrees.pdf) for highly efficient hash map data structures * parsers for [JSON](http://json.org) data and the text configuration files found in Unix system * doubly linked circular lists for reliable event queues * support for test and debugging of memory management problems such as memory leaks

Libnsa stands literally for "Library: Non Semper erit Aestas". It is a small C++ library which implements RSA encryption. The current version only creates the 4096 bit public and private keys.

A library for Lock-Free Data Structures

quadGT is a software package for the joint genotyping of two parents, child’s normal genome and child’s tumor genome based on sequencing reads aligned to a reference genome.

reputron is a knowledge extraction engine platform that covers all aspect of text mining, relevance, indexing and querying on a corpus of text documents.