Search Results for "git:/git.code.sf.net/p/docfetcher/code" - Page 11
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Showing 427 open source projects for "git:/git.code.sf.net/p/docfetcher/code"
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All-in-One Mental Health EHREnsora Health’s Mental Health EHR is designed for mental health professionals, therapists, and practice managers looking for a secure, user-friendly solution to streamline administrative tasks and improve efficiency in their practice management
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Entity Management SoftwareAutomate everything: entity compliance, registered agent services, annual report and BOI filings, org charts, and DBA/fictitious name and business registration renewals, so you can focus on higher-value work.
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Central Proteomics Facilities Pipeline
A data analysis pipeline for shotgun mass-spectrometry proteomics.
... * As of 2019, limited maintenance is being carried out by myself (now in the BioHPC high performance computing group at UTSW), to allow CPFP to install and run on RHEL 7 / CentOS 7, with updated TPP 5.1.0 and search tools. This updated code can be found in the utsw-biohpc branch of the git repository, and may become a 2.2.0 release if time and testing allows. -- David Trudgian - 2019/01/03 -
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CapAnalysis
PCAP from another point of view
CapAnalysis is a web visual tool for information security specialists, system administrators and everyone who needs to analyze large amounts of captured network traffic. Analyze TCP and UDP streams Support multible datasets Perform deep packet inspection Support filtering capability Source Code: https://github.com/xplico/CapAnalysis -
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RadiationHelper
Alpha, Beta, Gamma measurements and Nuclide exposure
RadiationHelper is a data analysis tool for : 1. gross alpha and beta radiation measurement and detector calibration using experimental data (counts acquired by alpha-beta devices). 2. gamma spectroscopy measurements and detector calibration using experimental data (spectra acquired by acquisition software such as Assayer, Gamma Vision, Maestro) 3. gross alpha,beta, gamma detector efficiencies and gamma peak efficiency can be theoretical computed using Monte-Carlo simulation technique for radiation transport (based on EGSnrc toolkit) 4.dose assessment in human body exposed to radiations from nuclides in several common scenarios such as air exposure, water submersion, ground surface, internal ingestion or inhalation. 5. quick dosimetry and shielding computations. It is platform independent (written entirely in Java). Source code included in jar files! Also, available on GitHub: https://github.com/ZiliasTheSaint/RadiationHelper.git Checkout for dependent modules! -
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Toolbox for handling X-ray transmission image data collected using the Xradia TXM system. We are constantly updating the code to implement other file formats as well - suggestions are welcome. Main articles: -) TXM-Wizard: a program for advanced data collection and evaluation in full-field transmission X-ray microscopy, Journal of Synchrotron Radiation, 19, 281-287. (2012) http://scripts.iucr.org/cgi-bin/paper_yard?hf5192 -) 3D elemental sensitive imaging using transmission X-ray microscopy, Analytical and Bioanalytical Chemistry, Volume 404, Issue 5, pp 1297-1301 (2012) http://link.springer.com/article/10.1007%2Fs00216-012-5818-9 -) Three-dimensional imaging of chemical phase transformations at the nanoscale with full-field transmission X-ray microscopy, Journal of Synchrotron Radiation, 18, 773-781. (2011) http://scripts.iucr.org/cgi-bin/paper?...
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DeskTime is a cloud-based time tracking softwareDeskTime is a high-performance, automated time tracking and workforce management solution for teams and freelancers. It runs silently in the background, logging computer activity from the moment of boot-up to ensure 100% accurate data without the need for manual timers.
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BERT
Connector for Excel and the programming languages R and Julia
...Everything else – loading the function into Excel, managing parameters, and handling type conversion – is done automatically for you. It really could not be any easier. BERT also has a console that you can use to control Excel in real time, right from your R code. And (if you want), you can call R functions from VBA as well. -
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As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/
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xsv
A fast CSV command line toolkit written in Rust
xsv is a command line program for indexing, slicing, analyzing, splitting and joining CSV files. Commands should be simple, fast and composable. Simple tasks should be easy. Performance trade offs should be exposed in the CLI interface. Composition should not come at the expense of performance. Let's say you're playing with some of the data from the Data Science Toolkit, which contains several CSV files. Maybe you're interested in the population counts of each city in the world. So grab the... -
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ChunJun
A data integration framework
...Easy to expand, highly flexible, newly expanded data source plugins can integrate with existing data source plugins instantly, plugin developers do not need to care about the code logic of other plugins. -
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SPar: Stream Parallelism in Multi-Cores
An Embedded C++ Domain-Specific Language
...The DSL uses standard C++ attributes to introduce annotations tagging the notable components of stream parallel applications: stream sources and stream processing stages. Latest version can be downloaded from the SVN using the following command: svn checkout svn://svn.code.sf.net/p/spar-dsl-compiler/svn/ spar -
GoAnywhere Managed File Transfer (MFT)GoAnywhere MFT provides secure managed file transfer for enterprises. Deployable on-premise, in the cloud, or in hybrid environments, GoAnywhere MFT software enables organizations to exchange data among employees, customers, and trading partners, as well as between systems, securely. GoAnywhere MFT was a recipient of the Cybersecurity Excellence Award for Secure File Transfer.
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arcgis-osm-editor
Toolset for GIS users to access OpenStreetMap through their Desktop
...ArcGIS Editor for OpenStreetMap is available for version 10 and higher of ArcMap (Basic, Standard, or Advanced). Installation requires administrator privileges. Documentation, FAQs, and source code are available on GitHub and released under the Apache 2.0 software license. -
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PHPCI
PHPCI is a free and open source continuous integration tool
PHPCI is a continuous integration (CI) server designed specifically for PHP applications. It automates tasks such as testing, code quality checks, and deployment, helping developers maintain code consistency and detect issues early. PHPCI supports various plugins and tools, including PHPUnit, PHPMD, and Codeception, making it highly customizable for different project needs. -
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This site hosts the source code for C++ version of the Broker for SBW, NOM module, advanced simulation suite, analysis applications and model editors.
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Objective-C And Swift Dependencies
Objective-C and Swift dependency visualizer
Objective-C Dependency Visualizer is a tool that generates dependency graphs for Objective-C projects, helping developers understand code structure and module relationships. -
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ParTools
Support for manual parallelization of sequential C programs.
ParTools allows the interactive analysis of a C program execution profile and data dependencies to facilitate the discovery and selection of suitable parallelization candidates in a manual parallelization process. The flow does not assume any specific parallelization technique, thus it can be broadly applied. The original (serial) C source is automatically annotated to trace the execution profile and data dependencies at run-time. The annotated program is then executed using a... -
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Flame Graphs
Stack trace visualizer
Flame graphs are a visualization of profiled software, allowing the most frequent code-paths to be identified quickly and accurately. They can be generated using my open source programs, which create interactive SVGs. See the Updates section for other implementations. Recently I've been helping with d3-flame-graph. The x-axis shows the stack profile population, sorted alphabetically (it is not the passage of time), and the y-axis shows stack depth, counting from zero at the bottom. ... -
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Bias is a cross-platform versatile information management application / Organizer
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GlycoPAT
Comprehensive, open-source tool for glycoproteomics MS data analysis
...This program provides a novel platform for the streamlined analysis of traditional LC-MSn based high-throughput experimental data for the identification of site-specific N- and O-linked glycosylation on various proteins. More details are available at https://www.VirtualGlycome.org/glycopat Source code also available at https://github.com/kaichengub/GlycoPAT If you use this software please cite: Gang Liu, Kai Cheng, Chi Y. Lo, Jun Li, Jun Qu and Sriram Neelamegham. " A comprehensive, open-source platform for mass spectrometry based glycoproteomics data analysis", Molecular Cell Proteomics, 2017 Sep 8, in press. https://doi.org/10.1074/mcp.M117.068239 -
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This is a very simple OpenGL visualization library with a 3D and 4D volume renderer. It can easily be reused in other projects (e.g. with medical volumes). It is just perfect for learning or great if you like to hack your own code.
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CCDLAB
A FITS image data viewer & reducer, and UVIT Data Reduction Pipeline.
...The latest CCDLAB installer can be downloaded here: https://github.com/user29A/CCDLAB/releases The Visual Studio 2017 project files can be found here: https://github.com/user29A/CCDLAB/ Those may not be the latest code files as code is generally updated a few times a week. If you want the latest project files then let me know. -
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...It helps you create the questionnaire, collect data, and provide general global network measures and data matrixes that can be used for further analysis by other software. Source code is hosted at http://github.com/egonet/egonet.
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ipytracer
Algorithm Visualizer for IPython/Jupyter Notebook
Algorithm Visualizer for IPython/Jupyter Notebook. If you use the display(TracerObject) code from where you want to see, you can use it without any special modification. -
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Hetionet
Hetionet: an integrative network of disease
Hetionet is a hetnet — network with multiple node and edge (relationship) types — which encodes biology. The hetnet was designed for Project Rephetio, which aims to systematically identify why drugs work and predict new therapies for drugs. The JSON and Neo4j formats contain node and edge properties, which are absent in the TSV and matrix formats, including licensing information. Therefore the recommended formats are JSON and Neo4j. Our hetio package in Python reads the JSON format, but it... -
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Illustrated Algorithms
Interactive algorithm visualizations
Inspired by Grokking Algorithms and python-execution-trace, this project aims to reveal the mechanics behind algorithms via interactive visualizations of their execution. Visual representations of variables and operations augment the control flow, alongside actual source code. You can fast forward and rewind the execution to closely observe how an algorithm works. The same code that is displayed next to the illustration is also decorated using babel-plugin-trace-execution and executed to record the context at every step. Literally the same source file. Going back and forth between function execution (and call stack when algorithm uses recursion) is effortless. ... -
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Rodeo
A data science IDE for Python
A data science IDE for Python. RODEO, that is an open-source python IDE and has been brought up by the folks at yhat, is a development environment that is lightweight, intuitive and yet customizable to its very core and also contains all the features mentioned above that were searched for so long. It is just like your very own personal home base for exploration and interpretation of data that aims at Data Scientists and answers the main question, "Is there anything like RStudio for Python?"... -
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PMM-Lab
Predictive Microbial Modeling plug-in for KNIME
...PMM-Lab has been initiated and provided by the Federal Institute for Risk Assessment - BfR (Berlin, Germany). The software is in Beta status. Before using the software you have to read and accept the license and disclaimer (https://sourceforge.net/p/pmmlab/wiki/Disclaimer/). If you do not agree, do not use this software.
