Showing 53 open source projects for "coding"

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  • 1
    Orange Data Mining

    Orange Data Mining

    Orange: Interactive data analysis

    ...Interactive data exploration for rapid qualitative analysis with clean visualizations. Graphic user interface allows you to focus on exploratory data analysis instead of coding, while clever defaults make fast prototyping of a data analysis workflow extremely easy. Place widgets on the canvas, connect them, load your datasets and harvest the insight! When teaching data mining, we like to illustrate rather than only explain.
    Downloads: 53 This Week
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  • 2
    Claude Scientific Skills

    Claude Scientific Skills

    A set of ready to use Agent Skills for research, science, engineering

    Claude Scientific Skills is a large open source collection of ready-to-use scientific capabilities that extend AI coding agents into full research assistants. The project provides more than 170 curated skills covering domains such as genomics, drug discovery, medical imaging, physics, and advanced data analysis. Each skill bundles documentation, examples, and tool integrations so agents can reliably execute complex multi-step scientific workflows.
    Downloads: 12 This Week
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  • 3
    JeeSite

    JeeSite

    A basic enterprise information development platform

    JeeSite is a high-efficiency, high-performance, and strong security open source Java EE rapid development platform based on a number of excellent open source projects, highly integrated and packaged. JeeSite is the best basic platform solution for you to quickly complete your project. JeeSite is the best study case for you to learn the Java platform. JeeSite is also the best assistant for private work. JeeSite is a Java-based development platform built on the Spring Framework, with Spring...
    Downloads: 3 This Week
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  • 4
    MyBatis Mapper4

    MyBatis Mapper4

    Mybatis common mapper, easy to use

    This book starts with a simple MyBatis query to build a basic development environment for learning MyBatis. Through a comprehensive sample code and test, the basic usage of adding, deleting, modifying, and checking operations in the MyBatis XML mode and annotation mode is explained, and the application of dynamic SQL in different aspects and the best practice program in the use process are introduced. Provides a wealth of examples for MyBatis advanced mapping, stored procedures, and type...
    Downloads: 0 This Week
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  • 5
    LabPlot

    LabPlot

    Data Visualization and Analysis

    LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone.
    Downloads: 45 This Week
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  • 6
    GrainSizeTools script

    GrainSizeTools script

    A Python script for estimating the grain size from thin sections

    ...The script requires as the input the areas of the grain profiles measured grain-by-grain on planar sections and does not require previous experience with Python programming language (see documentation below and FAQ). For users with coding skills, the script is organized in a modular way facilitating the reuse and code extension. Lopez-Sanchez, MA (2018). GrainSizeTools: a Python script for grain size analysis and paleopiezometry based on grain size. Journal of Open Source Software, 3(30), 863, https://doi.org/10.21105/joss.00863
    Downloads: 3 This Week
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  • 7

    CPAT

    RNA coding potential assessment tool

    Using RNA-seq, tens of thousands of novel transcripts and isoforms have been identified (Djebali, et al Nature, 2012 , Carbili et al, Gene & Development, 2011) The discovery of these hidden transcriptome rejuvenate the need of distinguishing coding and noncoding RNA. However, Most previous coding potential prediction methods heavily rely on alignment, either pairwise alignment to search for protein evidence or multiple alignments to calculate phylogenetic conservation score (such as CPC , PhyloCSF and RNACode ). This is because most previously identified transcripts including protein coding RNA and short, housekeeping/regulatory RNAs such as snRNAs, snoRNA and tRNA are highly conserved. ...
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    Downloads: 22 This Week
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  • 8
    MLPACK is a C++ machine learning library with emphasis on scalability, speed, and ease-of-use. Its aim is to make machine learning possible for novice users by means of a simple, consistent API, while simultaneously exploiting C++ language features to provide maximum performance and flexibility for expert users. * More info + downloads: https://mlpack.org * Git repo: https://github.com/mlpack/mlpack
    Downloads: 0 This Week
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  • 9
    flex-capital-platform

    flex-capital-platform

    Drag n Drop Fintech Platform

    Flex Capital is an intuitive drag n drop software enabling any business to quickly launch financial products with no coding knowledge required.
    Downloads: 0 This Week
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  • 10

    MutaNET

    NGS Pipeline and Automated Mutation Analysis

    MutaNET comes with a next generation sequencing (NGS) pipeline that calls mutations based on paired-end NGS reads, an automated mutation analysis tool and various file converters and mergers. The mutation analysis feature considers the coding region, protein domains, regulation and transcription factor binding site information, and can be used to analyse the potential impact of mutations on antibiotic resistance.
    Downloads: 0 This Week
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  • 11

    queXC

    Web based system for cleaning and classifying open text fields

    An Open Source, web based data cleaning and coding system. queXC takes a data file (such as questionnaire data) and cleans the text input fields by spacing and spell checking them. Operators then code text fields using new/existing coding schemes.
    Downloads: 2 This Week
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  • 12
    C++QED

    C++QED

    A framework for simulating open quantum dynamics

    ...The principal concept of the design of C++QEDv2 is that all information available at compile time should be processed as such, with the help of TMP. The framework is very sensitive to performance both in computer resources and coding/design.
    Downloads: 0 This Week
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  • 13

    packeis

    Check for selection of RNA secondary structure

    PACKEIS is a software that allows us to assess whether or not a coding sequence represents an extreme solution in terms of backfolding, considering the alternative coding sequences that could have been realized by evolution in order to encode the given peptide sequence based on usage of synonymous codons.
    Downloads: 0 This Week
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  • 14
    Eclipse Verilog editor is a plugin for the Eclipse IDE. It provides Verilog(IEEE-1364) and VHDL language specific code viewer, contents outline, code assist etc. It helps coding and debugging in hardware development based on Verilog or VHDL.
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    Downloads: 5 This Week
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  • 15
    Application to optimize DNA sequences coding protein to put in in the different organizm (f.e. human protein in E.Coli). It proposes the optimal cutting places to connect many shorter fragments into bigger one using ligaze.
    Downloads: 0 This Week
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  • 16
    Coffee-Physics

    Coffee-Physics

    A simple, lightweight physics engine written in CoffeeScript

    Coffee-Physics is a minimalist physics engine written in CoffeeScript that favors approachable, creative-coding workflows over heavyweight simulation frameworks. It models motion with a particle system and uses simple constraints and behaviors—such as gravity, attraction/repulsion, drag, and springs—to create believable movement with very little code. The design is intentionally composable: you attach behaviors to particles or groups and let the update loop integrate positions, producing emergent effects from a few rules. ...
    Downloads: 0 This Week
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  • 17
    Colloquium QDA

    Colloquium QDA

    A free and open source qualitative ethnographic interview coding tool.

    Colloquium QDA is a tool for custom coding and analyzing qualitative ethnographic interviews. To run, make sure you first have JRE 8 or later installed (http://www.oracle.com/technetwork/java/javase/downloads/). Colloquium QDA is an open source cross-platform Java Swing app utilizing an embedded Java DB with Lucene integrated search.
    Downloads: 1 This Week
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  • 18
    PANTHER project: software for modeling of protein sequence and function evolution, and tools for applying these data to the analysis of genome data, expression data and coding SNPs. Details available at http://www.pantherdb.org.
    Downloads: 0 This Week
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  • 19
    State Controller Library

    State Controller Library

    A C++ framework that implements generalised finite state machines.

    The State Controller Library is a generic platform-independent C++ framework that allows finite state machines and multi-action planning generalisations thereof to be realised. The structure and implementation of this library focuses on the application of finite state machines to real-time control loops, but can be reasonably adapted for virtually any other application, even completely unrelated to control systems. An emphasis has been placed on having very low overhead so as not to hurt...
    Downloads: 0 This Week
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  • 20
    riboFR-seq

    riboFR-seq

    A novel approach to linking 16S rRNA amplicon profiles to metagenomes

    ...Here we propose a novel approach, RiboFR-Seq (Ribosomal RNA gene Flanking Region Sequencing), for capturing both ribosomal RNA variable regions and their flanking protein-coding genes simultaneously. We demonstrated that RiboFR-Seq could detect the vast majority of bacteria not only in well-studied microbiomes but also in novel communities with limited reference genomes. Combined with classical amplicon sequencing and shotgun metagenome sequencing, RiboFR-Seq can link the annotations of 16S rRNA and metagenomic contigs to make a consensus classification.
    Downloads: 0 This Week
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  • 21

    Control Interface Victor 86C, Voltcraft

    Control Voltcraft Power Supply and Victor 86C Multimeter

    ANNOUNCEMENT Project has moved to a proprietary website! http://www.instruman.it Updated source code available at https://instruman.codeplex.com/ This is an interface used to program and control Voltcraft DPPS-32-15 Power Supply, and to log data from Victor 86C Multimeter. It's an all-in-one solution to use the two instruments at the same time for Scientific, Research and Study purposes. Features avaible are the following: -Victor 86C USB HID connection protocol -86C data reading...
    Downloads: 0 This Week
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  • 22

    TransGeneScan

    TransGeneScan is a gene finding tool for metatranscriptomic sequences

    ...Please find the latest version in Github. TransGeneScan is a gene finding tool for Metatranscriptomic sequences. TransGeneScan incorporates strand-speci c hidden states, representing coding sequences in sense and anti-sense strands on transcripts in a Hidden Markov Model similar to the one used in FragGeneScan (http://fraggenescan.sourceforge.net/), and can predict a sense transcript containing one or multiple genes (in an operon) or an antisense transcript.
    Downloads: 0 This Week
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  • 23

    UniPyRange

    Tool to fetch protein/DNA truncation constructs from Uniprot DB

    ...Lets say you want the amino acid sequence of range 128-387 from a 1000 amino acid protein - this script will help you to avoid counting mistakes by just showing you the specified sequence in amino acids and coding DNA base pairs (ideal for amplification primer design) of a specified Uniprot ID. - Requires BioPython (3) and Bioservices Package (4) (1) The UniProt Consortium UniProt: a hub for protein information Nucleic Acids Res. 43: D204-D212 (2015). (2) RefSeq: an update on mammalian reference sequences. Nucleic Acids Res. 2014 Jan 1;42(1):D756-63...
    Downloads: 0 This Week
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  • 24
    arcgis-viewer-flex

    arcgis-viewer-flex

    Source code for ArcGIS Viewer for Flex - a great application framework

    The ArcGIS Viewer for Flex is a customizable, open-source framework for building rich GIS web applications using Adobe Flex and ArcGIS Server. It provides a modular structure with built-in map tools, widgets, and themes. Users can create interactive maps with minimal coding and extend the viewer with custom widgets for tasks like geocoding, editing, and routing. It was widely used before HTML5-based viewers became standard.
    Downloads: 2 This Week
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  • 25
    scapcs

    scapcs

    Computer Assistant for ICD-10-PCS Coding

    This is Dr Shee's Computer Assistant for ICD-10-PCS Coding system. Brief as SCAPCS, Read like " scabies" and use a scabies picture as it's icon. By Using this program, the user can coding the ICD-10-PCS very easily without any assistant from the original ICD-10-PCS tabular. The first version is the Chinese version at 2014-05, An i18n version was released at 2014-08-23 (v 0.99b). The final open version(1.00f) was released at 2014-11-15.
    Downloads: 2 This Week
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