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Written in Applescript, FASTApple is a suite of utilities for the average computational biologist that make working with FASTA files fast and easy. A basic and straightforward GUI makes choosing files a cinch.
Currently three utilities are included:
FASTA Concatenater combines multiple FASTA files into a single FASTA file.
FASTA Gene Concatenater strings the DNA sequences of each taxon in a set of pre-aligned FASTA files with identical taxa. Specifically designed to prepare RAxML analyses, it conveniently creates a partition file in addition to the concatenated file.
GenBank Renamer automatically renames the taxa in a FASTA file downloaded from GenBank in the format Genus_species_accession
Features
- Combines multiple FASTA files
- Concatenates several genes
- Automatically generates RAxML partition file
- Renames GenBank downloads
Categories
Bio-InformaticsLicense
GNU General Public License version 3.0 (GPLv3)Follow FASTApple
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