Analyses and Interactive visualizations of the structures, functions and actions of biomolecules including molecular surface computation, and protein-ligand interface and protein-ligand docking where the ligand could a small compound, a nucleic acid, membrane and other proteins, written in C++/Qt/openGL/GLSL with more than 125,000 lines of codes. In addition to Qt, the only external library needed is GSL everything else is coded from the scratch.

Features

  • The accurate and robust computation of molecular surface of both interiors and exteriors with no modifications to atomic radius and no restart
  • Qt/OpenGL/GLSL, SSE and parallel computation
  • Rigorous processing of PDB structure files
  • Structural clustering
  • Best fitting of helix to helical curves
  • Novel sheet representation that best catches both geometrical and physical properties
  • Protein-ligand interfaces in terms of SES-derived properties where the ligand could be a small compound, a nucleic acid, membranes and other proteins

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Additional Project Details

Operating Systems

Linux

Intended Audience

Advanced End Users

User Interface

OpenGL, Qt

Programming Language

C++

Related Categories

C++ Chemistry Software, C++ Bio-Informatics Software, C++ Data Visualization Software

Registered

2016-12-06