SPiM2Eclipse

Stochastic Pi Machine (SPiM), created by Microsoft, is a programming language for modeling biological processes. Two tools are available from Microsoft for simulation. A web application Visual SPiM, and a destkop application SPiM Player. Both simulation tools require to be run on a Windows platform.

Fortunately Microsoft has also released a command line version for Linux and Mac OS based on OCAML however this version will only output a CSV file for the simulation results.

SPiM2Eclipse provides a bridge for those running SPiM from the command-line by allowing simulations to be completed by a single click, displaying an embedded plot of the results.

Features:
-As an Eclipse plugin you have all of the powerful features of Eclipse available to you.

-Syntax color highlighting

-One-click simulation with plotting

For more information on SPiM see the offical project website at: http://research.microsoft.com/en-us/projects/spim/

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Additional Project Details

Operating Systems

Linux, Mac, Windows

Intended Audience

Education

User Interface

Eclipse

Programming Language

Java

Related Categories

Java Molecular Science Software, Java Simulation Software, Java Molecular Mechanics Software

Registered

2013-02-06

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