Browse Code
UniversalMer is a k-mer counting tool for multiple size of k at once. It is available for DNA, RNA, and protein sequences. The program counts and summarizes the exact frequency of all k-mers from 1-mer to a user-defined maximum length (kmax). This kmax can be specified as any length or can be automatically determined by the longest repeated patterns found in the input sequence.
Features
- Counting k-mers with multiple k's value at once.
- Counting 1-mers to kmax specified by user.
- Counting large k-mers in practical time
- Support k limit up to any sizes
- Finding maximum length of repeat patterns
- Support DNA sequences, RNA sequences, and proteins sequences.
- Practical running time and memory usage
- Show spectrum of 1-mers to kmax-mers within seconds
- Dumping 1-mers to kmax-mers patterns within seconds
- Enable config minimum frequency
Project Samples
Follow UniversalMer2
Other Useful Business Software
Loan management software that makes it easy.
Bryt Software is ideal for lending professionals who are looking for a feature rich loan management system that is intuitive and easy to use. We are 100% cloud-based, software as a service. We believe in providing our customers with fair and honest pricing. Our monthly fees are based on your number of users and we have a minimal implementation charge.
Rate This Project
Login To Rate This Project
User Reviews
Be the first to post a review of UniversalMer2!
