variantkey

Binary files for the variantkey library:
https://github.com/Genomicsplc/variantkey

The binary files are generated using the script:
https://github.com/Genomicsplc/variantkey/blob/master/resources/tools/vkhexbin.sh
from the Human Variation Sets in VCF Format [National Library of Medicine (NLM)]:
ftp://ftp.ncbi.nih.gov/snp/organisms/

Features

rsID to VariantKey binary lookup table
VariantKey to rsID binary lookup table
FASTA Genome Reference binary file
Lookup table for non-reversible VariantKeys

Project Activity

See All Activity >

License

Public Domain

Follow variantkey

variantkey Web Site

Other Useful Business Software

Skillfully - The future of skills based hiring

Realistic Workplace Simulations that Show Applicant Skills in Action

Skillfully transforms hiring through AI-powered skill simulations that show you how candidates actually perform before you hire them. Our platform helps companies cut through AI-generated resumes and rehearsed interviews by validating real capabilities in action. Through dynamic job specific simulations and skill-based assessments, companies like Bloomberg and McKinsey have cut screening time by 50% while dramatically improving hire quality.

Learn More

Additional Project Details

Intended Audience

Science/Research

Database Environment

Proprietary file format

Registered

2018-11-10

Similar Business Software

Cufflinks

Cufflinks assemble transcripts, estimate their abundances and test for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these...

See Software
OmnibusX

In the world of biological data science, navigating vast and complex datasets can be a daunting task. Our software toolkit is designed to empower you by accelerating analysis, promoting accessibility, and providing comprehensive visualization tools to help you make sense of these intricate...

See Software
OmicsBox

OmicsBox is a leading bioinformatics solution that offers end-to-end data analysis of genomes, transcriptomes, metagenomes, and genetic variation studies. The application is used by top private and public research institutions worldwide and allows researchers to easily process large and complex...

See Software
Geneious

Geneious Prime makes bioinformatics accessible by transforming raw data into visualizations that make sequence analysis intuitive and user-friendly. Simple sequence assembly and easy editing of contigs. Automatic annotation for gene prediction, motifs, translation, and variant calling. Genotype...

See Software
ruffus

Ruffus is a computation pipeline library for python. It is open-sourced, powerful and user-friendly, and widely used in science and bioinformatics. Ruffus is designed to allow scientific and other analyses to be automated with the minimum of fuss and the least effort. Suitable for the simplest...

See Software
Galaxy

Galaxy is an open source, web-based platform for data-intensive biomedical research. If you are new to Galaxy start here or consult our help resources. You can install your own Galaxy by following the tutorial and choosing from thousands of tools from the tool shed. This instance of Galaxy is...

See Software