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Open access and web based virome population profiling for multi-sample metagenomics NGS, please note that the web server has been updated to:
http://vipie.rd.tuni.fi/vipie/index.html
Now supporting COVID-19
User guide:
http://vipie.rd.tuni.fi/vipie/doc/vipie_user_guide.pdf
Open access:
https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-3721-7
Please cite:
Lin, J., Kramna, L., Autio, R. et al. Vipie: web pipeline for parallel characterization of viral populations from multiple NGS samples. BMC Genomics 18, 378 (2017). https://doi.org/10.1186/s12864-017-3721-7
Features
- virome
- metagenomics
- shannon diversity
- covid19
- 16S
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