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IT teams in need of a Component Library solution
About h5py
The h5py package is a Pythonic interface to the HDF5 binary data format. It lets you store huge amounts of numerical data, and easily manipulate that data from NumPy. For example, you can slice into multi-terabyte datasets stored on disk, as if they were real NumPy arrays. Thousands of datasets can be stored in a single file, categorized and tagged however you want. H5py uses straightforward NumPy and Python metaphors, like dictionary and NumPy array syntax. For example, you can iterate over datasets in a file, or check out the .shape or .dtype attributes of datasets. You don't need to know anything special about HDF5 to get started. In addition to the easy-to-use high level interface, h5py rests on a object-oriented Cython wrapping of the HDF5 C API. Almost anything you can do from C in HDF5, you can do from h5py.
Other Popular Alternatives & Related Software
Bokeh
Bokeh makes it simple to create common plots, but also can handle custom or specialized use-cases. Plots, dashboards, and apps can be published in web pages or Jupyter notebooks. Python has an incredible ecosystem of powerful analytics tools: NumPy, Scipy, Pandas, Dask, Scikit-Learn, OpenCV, and more. With a wide array of widgets, plot tools, and UI events that can trigger real Python callbacks, the Bokeh server is the bridge that lets you connect these tools to rich, interactive visualizations in the browser. Microscopium is a project maintained by researchers at Monash University. It allows researchers to discover new gene or drug functions by exploring large image datasets with Bokeh’s interactive tools. Panel is a tool for polished data presentation that utilizes the Bokeh server. It is created and supported by Anaconda. Panel makes it simple to create custom interactive web apps and dashboards by connecting user-defined widgets to plots, images, tables, or text.
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Cython
Cython is an optimizing static compiler for both the Python programming language and the extended Cython programming language (based on Pyrex). It makes writing C extensions for Python as easy as Python itself. Cython gives you the combined power of Python and C to let you write Python code that calls back and forth from and to C or C++ code natively at any point. Easily tune readable Python code into plain C performance by adding static type declarations, also in Python syntax. Use combined source code level debugging to find bugs in your Python, Cython, and C code. Interact efficiently with large data sets, e.g. using multi-dimensional NumPy arrays. Quickly build your applications within the large, mature, and widely used CPython ecosystem. The Cython language is a superset of the Python language that additionally supports calling C functions and declaring C types on variables and class attributes.
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broot
The ROOT data analysis framework is used much in High Energy Physics (HEP) and has its own output format (.root). ROOT can be easily interfaced with software written in C++. For software tools in Python there exists pyROOT. Unfortunately, pyROOT does not work well with python3.4. broot is a small library that converts data in python numpy ndarrays to ROOT files containing trees with a branch for each array. The goal of this library is to provide a generic way of writing python numpy datastructures to ROOT files. The library should be portable and supports both python2, python3, ROOT v5 and ROOT v6 (requiring no modifications on the ROOT part, just the default installation). Installation of the library should only require a user to compile to library once or install it as a python package.
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NumPy
Fast and versatile, the NumPy vectorization, indexing, and broadcasting concepts are the de-facto standards of array computing today. NumPy offers comprehensive mathematical functions, random number generators, linear algebra routines, Fourier transforms, and more. NumPy supports a wide range of hardware and computing platforms, and plays well with distributed, GPU, and sparse array libraries. The core of NumPy is well-optimized C code. Enjoy the flexibility of Python with the speed of compiled code. NumPy’s high level syntax makes it accessible and productive for programmers from any background or experience level. NumPy brings the computational power of languages like C and Fortran to Python, a language much easier to learn and use. With this power comes simplicity: a solution in NumPy is often clear and elegant.
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Pricing
Starting Price:
Free
Free Version:
Free Version available.
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HDF5
www.h5py.org
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